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Error creating bean with name entityManagerFactory with Hibernate 5.2.13.Final

I was recently running a spring-boot application with no trouble until the hibernate-core dependency came to version 5.2.13.Final. It is strange and the difference with other question with a similar title is that if I just overwrite the version of hibernate-core dependency back to 5.2.12.Final, things will be right.

So I just wondering the reason why version 5.2.13.Final goes wrong, and how to fix this if I hope to stick dependencies up-to-date.

Here is my pom.xml:

<parent>
    <groupId>org.springframework.boot</groupId>
    <artifactId>spring-boot-starter-parent</artifactId>
    <version>2.0.0.BUILD-SNAPSHOT</version>
    <relativePath/> <!-- lookup parent from repository -->
</parent>

<properties>
    <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
    <project.reporting.outputEncoding>UTF-8</project.reporting.outputEncoding>
    <java.version>1.8</java.version>
</properties>

<dependencies>
    <dependency>
        <groupId>org.springframework.boot</groupId>
        <artifactId>spring-boot-starter-thymeleaf</artifactId>
    </dependency>
    <dependency>
        <groupId>org.springframework.boot</groupId>
        <artifactId>spring-boot-starter-data-jpa</artifactId>
    </dependency>
    <dependency>
        <groupId>com.microsoft.sqlserver</groupId>
        <artifactId>mssql-jdbc</artifactId>
        </dependency>
    <dependency>
        <groupId>org.springframework.boot</groupId>
        <artifactId>spring-boot-starter-test</artifactId>
        <scope>test</scope>
    </dependency>
    <dependency>
        <groupId>org.springframework.boot</groupId>
        <artifactId>spring-boot-starter-web</artifactId>
    </dependency>
    <dependency>
        <groupId>org.springframework</groupId>
        <artifactId>spring-context-support</artifactId>
        </dependency>
    <dependency>
        <groupId>org.springframework.boot</groupId>
        <artifactId>spring-boot-starter-mail</artifactId>
        <version>1.5.8.RELEASE</version>
    </dependency>
    <dependency>
        <groupId>org.hibernate</groupId>
        <artifactId>hibernate-core</artifactId>
    </dependency>
    <dependency>
        <groupId>org.hibernate</groupId>
        <artifactId>hibernate-entitymanager</artifactId>
    </dependency>
    <dependency>
        <groupId>org.springframework.integration</groupId>
        <artifactId>spring-integration-core</artifactId>
        </dependency>
    <dependency>
        <groupId>org.springframework.integration</groupId>
        <artifactId>spring-integration-ftp</artifactId>
        </dependency>
    <dependency>  
        <groupId>commons-net</groupId>  
        <artifactId>commons-net</artifactId>  
        <version>3.6</version>  
    </dependency>  
</dependencies>

<build>
    <plugins>
        <plugin>
            <groupId>org.springframework.boot</groupId>
            <artifactId>spring-boot-maven-plugin</artifactId>
        </plugin>
        <plugin>  
            <groupId>org.apache.maven.plugins</groupId>  
            <artifactId>maven-surefire-plugin</artifactId>  
            <configuration>  
                <testFailureIgnore>true</testFailureIgnore>              
            </configuration>  
        </plugin>
        <plugin>
          <artifactId>maven-assembly-plugin</artifactId>
          <configuration>
            <descriptorRefs>
              <descriptorRef>jar-with-dependencies</descriptorRef>
            </descriptorRefs>
            <archive>
              <manifest>
                <mainClass>fully.qualified.MainClass</mainClass>
              </manifest>
            </archive>
          </configuration>
        </plugin>
    </plugins>
</build>

<repositories>

    <repository>
        <id>spring-snapshots</id>
        <name>Spring Snapshots</name>
        <url>https://repo.spring.io/snapshot</url>
        <snapshots>
            <enabled>true</enabled>
        </snapshots>
    </repository>
    <repository>
        <id>spring-milestones</id>
        <name>Spring Milestones</name>
        <url>https://repo.spring.io/milestone</url>
        <snapshots>
            <enabled>false</enabled>
        </snapshots>
    </repository>
</repositories>

<pluginRepositories>
    <pluginRepository>
        <id>spring-snapshots</id>
        <name>Spring Snapshots</name>
        <url>https://repo.spring.io/snapshot</url>
        <snapshots>
            <enabled>true</enabled>
        </snapshots>
    </pluginRepository>
    <pluginRepository>
        <id>spring-milestones</id>
        <name>Spring Milestones</name>
        <url>https://repo.spring.io/milestone</url>
        <snapshots>
            <enabled>false</enabled>
        </snapshots>
    </pluginRepository>
</pluginRepositories>

and error message:

2018-02-09 10:10:11.214  INFO 17228 --- [           main] org.hibernate.Version                    : HHH000412: Hibernate Core {5.2.13.Final}
2018-02-09 10:10:11.217  INFO 17228 --- [           main] org.hibernate.cfg.Environment            : HHH000206: hibernate.properties not found
2018-02-09 10:10:11.303  INFO 17228 --- [           main] o.hibernate.annotations.common.Version   : HCANN000001: Hibernate Commons Annotations {5.0.1.Final}
2018-02-09 10:10:11.345  WARN 17228 --- [           main] ConfigServletWebServerApplicationContext : Exception encountered during context initialization - cancelling refresh attempt: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'entityManagerFactory' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaConfiguration.class]: Invocation of init method failed; nested exception is java.lang.NoClassDefFoundError: javassist/bytecode/ClassFile
2018-02-09 10:10:11.346  INFO 17228 --- [           main] com.zaxxer.hikari.HikariDataSource       : HikariPool-1 - Shutdown initiated...
2018-02-09 10:10:11.351  INFO 17228 --- [           main] com.zaxxer.hikari.HikariDataSource       : HikariPool-1 - Shutdown completed.
2018-02-09 10:10:11.355  INFO 17228 --- [           main] o.apache.catalina.core.StandardService   : Stopping service [Tomcat]
2018-02-09 10:10:11.374  INFO 17228 --- [           main] ConditionEvaluationReportLoggingListener : 

Error starting ApplicationContext. To display the conditions report re-run your application with 'debug' enabled.
2018-02-09 10:10:11.386 ERROR 17228 --- [           main] o.s.boot.SpringApplication               : Application run failed

org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'entityManagerFactory' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaConfiguration.class]: Invocation of init method failed; nested exception is java.lang.NoClassDefFoundError: javassist/bytecode/ClassFile
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1710) ~[spring-beans-5.0.3.RELEASE.jar:5.0.3.RELEASE]
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:583) ~[spring-beans-5.0.3.RELEASE.jar:5.0.3.RELEASE]
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:502) ~[spring-beans-5.0.3.RELEASE.jar:5.0.3.RELEASE]
    at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:312) ~[spring-beans-5.0.3.RELEASE.jar:5.0.3.RELEASE]
    at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:228) ~[spring-beans-5.0.3.RELEASE.jar:5.0.3.RELEASE]
    at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:310) ~[spring-beans-5.0.3.RELEASE.jar:5.0.3.RELEASE]
    at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:200) ~[spring-beans-5.0.3.RELEASE.jar:5.0.3.RELEASE]
    at org.springframework.context.support.AbstractApplicationContext.getBean(AbstractApplicationContext.java:1085) ~[spring-context-5.0.3.RELEASE.jar:5.0.3.RELEASE]
    at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:858) ~[spring-context-5.0.3.RELEASE.jar:5.0.3.RELEASE]
    at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:549) ~[spring-context-5.0.3.RELEASE.jar:5.0.3.RELEASE]
    at org.springframework.boot.web.servlet.context.ServletWebServerApplicationContext.refresh(ServletWebServerApplicationContext.java:140) ~[spring-boot-2.0.0.BUILD-SNAPSHOT.jar:2.0.0.BUILD-SNAPSHOT]
    at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:752) [spring-boot-2.0.0.BUILD-SNAPSHOT.jar:2.0.0.BUILD-SNAPSHOT]
    at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:388) [spring-boot-2.0.0.BUILD-SNAPSHOT.jar:2.0.0.BUILD-SNAPSHOT]
    at org.springframework.boot.SpringApplication.run(SpringApplication.java:327) [spring-boot-2.0.0.BUILD-SNAPSHOT.jar:2.0.0.BUILD-SNAPSHOT]
    at org.springframework.boot.SpringApplication.run(SpringApplication.java:1246) [spring-boot-2.0.0.BUILD-SNAPSHOT.jar:2.0.0.BUILD-SNAPSHOT]
    at org.springframework.boot.SpringApplication.run(SpringApplication.java:1234) [spring-boot-2.0.0.BUILD-SNAPSHOT.jar:2.0.0.BUILD-SNAPSHOT]
    at com.cmhk.alarmmap.AlarmMapApplication.main(AlarmMapApplication.java:27) [classes/:na]
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[na:1.8.0_151]
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[na:1.8.0_151]
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[na:1.8.0_151]
    at java.lang.reflect.Method.invoke(Method.java:498) ~[na:1.8.0_151]
    at org.springframework.boot.maven.AbstractRunMojo$LaunchRunner.run(AbstractRunMojo.java:496) [spring-boot-maven-plugin-2.0.0.BUILD-SNAPSHOT.jar:2.0.0.BUILD-SNAPSHOT]
    at java.lang.Thread.run(Thread.java:748) [na:1.8.0_151]
Caused by: java.lang.NoClassDefFoundError: javassist/bytecode/ClassFile
    at org.hibernate.boot.archive.scan.spi.ClassFileArchiveEntryHandler.toClassFile(ClassFileArchiveEntryHandler.java:61) ~[hibernate-core-5.2.13.Final.jar:5.2.13.Final]
    at org.hibernate.boot.archive.scan.spi.ClassFileArchiveEntryHandler.handleEntry(ClassFileArchiveEntryHandler.java:47) ~[hibernate-core-5.2.13.Final.jar:5.2.13.Final]
    at org.hibernate.boot.archive.internal.ExplodedArchiveDescriptor.processDirectory(ExplodedArchiveDescriptor.java:143) ~[hibernate-core-5.2.13.Final.jar:5.2.13.Final]
    at org.hibernate.boot.archive.internal.ExplodedArchiveDescriptor.processDirectory(ExplodedArchiveDescriptor.java:118) ~[hibernate-core-5.2.13.Final.jar:5.2.13.Final]
    at org.hibernate.boot.archive.internal.ExplodedArchiveDescriptor.processDirectory(ExplodedArchiveDescriptor.java:118) ~[hibernate-core-5.2.13.Final.jar:5.2.13.Final]
    at org.hibernate.boot.archive.internal.ExplodedArchiveDescriptor.processDirectory(ExplodedArchiveDescriptor.java:118) ~[hibernate-core-5.2.13.Final.jar:5.2.13.Final]
    at org.hibernate.boot.archive.internal.ExplodedArchiveDescriptor.visitArchive(ExplodedArchiveDescriptor.java:54) ~[hibernate-core-5.2.13.Final.jar:5.2.13.Final]
    at org.hibernate.boot.archive.scan.spi.AbstractScannerImpl.scan(AbstractScannerImpl.java:47) ~[hibernate-core-5.2.13.Final.jar:5.2.13.Final]
    at org.hibernate.boot.model.process.internal.ScanningCoordinator.coordinateScan(ScanningCoordinator.java:75) ~[hibernate-core-5.2.13.Final.jar:5.2.13.Final]
    at org.hibernate.boot.model.process.spi.MetadataBuildingProcess.prepare(MetadataBuildingProcess.java:98) ~[hibernate-core-5.2.13.Final.jar:5.2.13.Final]
    at org.hibernate.jpa.boot.internal.EntityManagerFactoryBuilderImpl.<init>(EntityManagerFactoryBuilderImpl.java:229) ~[hibernate-core-5.2.13.Final.jar:5.2.13.Final]
    at org.hibernate.jpa.boot.internal.EntityManagerFactoryBuilderImpl.<init>(EntityManagerFactoryBuilderImpl.java:164) ~[hibernate-core-5.2.13.Final.jar:5.2.13.Final]
    at org.springframework.orm.jpa.vendor.SpringHibernateJpaPersistenceProvider.createContainerEntityManagerFactory(SpringHibernateJpaPersistenceProvider.java:51) ~[spring-orm-5.0.3.RELEASE.jar:5.0.3.RELEASE]
    at org.springframework.orm.jpa.LocalContainerEntityManagerFactoryBean.createNativeEntityManagerFactory(LocalContainerEntityManagerFactoryBean.java:365) ~[spring-orm-5.0.3.RELEASE.jar:5.0.3.RELEASE]
    at org.springframework.orm.jpa.AbstractEntityManagerFactoryBean.buildNativeEntityManagerFactory(AbstractEntityManagerFactoryBean.java:388) ~[spring-orm-5.0.3.RELEASE.jar:5.0.3.RELEASE]
    at org.springframework.orm.jpa.AbstractEntityManagerFactoryBean.afterPropertiesSet(AbstractEntityManagerFactoryBean.java:377) ~[spring-orm-5.0.3.RELEASE.jar:5.0.3.RELEASE]
    at org.springframework.orm.jpa.LocalContainerEntityManagerFactoryBean.afterPropertiesSet(LocalContainerEntityManagerFactoryBean.java:341) ~[spring-orm-5.0.3.RELEASE.jar:5.0.3.RELEASE]
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1769) ~[spring-beans-5.0.3.RELEASE.jar:5.0.3.RELEASE]
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1706) ~[spring-beans-5.0.3.RELEASE.jar:5.0.3.RELEASE]
    ... 22 common frames omitted
Caused by: java.lang.ClassNotFoundException: javassist.bytecode.ClassFile
    at java.net.URLClassLoader.findClass(URLClassLoader.java:381) ~[na:1.8.0_151]
    at java.lang.ClassLoader.loadClass(ClassLoader.java:424) ~[na:1.8.0_151]
    at java.lang.ClassLoader.loadClass(ClassLoader.java:357) ~[na:1.8.0_151]
    ... 41 common frames omitted

[WARNING] 
java.lang.reflect.InvocationTargetException
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at org.springframework.boot.maven.AbstractRunMojo$LaunchRunner.run(AbstractRunMojo.java:496)
    at java.lang.Thread.run(Thread.java:748)
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'entityManagerFactory' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaConfiguration.class]: Invocation of init method failed; nested exception is java.lang.NoClassDefFoundError: javassist/bytecode/ClassFile
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1710)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:583)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:502)
    at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:312)
    at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:228)
    at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:310)
    at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:200)
    at org.springframework.context.support.AbstractApplicationContext.getBean(AbstractApplicationContext.java:1085)
    at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:858)
    at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:549)
    at org.springframework.boot.web.servlet.context.ServletWebServerApplicationContext.refresh(ServletWebServerApplicationContext.java:140)
    at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:752)
    at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:388)
    at org.springframework.boot.SpringApplication.run(SpringApplication.java:327)
    at org.springframework.boot.SpringApplication.run(SpringApplication.java:1246)
    at org.springframework.boot.SpringApplication.run(SpringApplication.java:1234)
    at com.cmhk.alarmmap.AlarmMapApplication.main(AlarmMapApplication.java:27)
    ... 6 more
Caused by: java.lang.NoClassDefFoundError: javassist/bytecode/ClassFile
    at org.hibernate.boot.archive.scan.spi.ClassFileArchiveEntryHandler.toClassFile(ClassFileArchiveEntryHandler.java:61)
    at org.hibernate.boot.archive.scan.spi.ClassFileArchiveEntryHandler.handleEntry(ClassFileArchiveEntryHandler.java:47)
    at org.hibernate.boot.archive.internal.ExplodedArchiveDescriptor.processDirectory(ExplodedArchiveDescriptor.java:143)
    at org.hibernate.boot.archive.internal.ExplodedArchiveDescriptor.processDirectory(ExplodedArchiveDescriptor.java:118)
    at org.hibernate.boot.archive.internal.ExplodedArchiveDescriptor.processDirectory(ExplodedArchiveDescriptor.java:118)
    at org.hibernate.boot.archive.internal.ExplodedArchiveDescriptor.processDirectory(ExplodedArchiveDescriptor.java:118)
    at org.hibernate.boot.archive.internal.ExplodedArchiveDescriptor.visitArchive(ExplodedArchiveDescriptor.java:54)
    at org.hibernate.boot.archive.scan.spi.AbstractScannerImpl.scan(AbstractScannerImpl.java:47)
    at org.hibernate.boot.model.process.internal.ScanningCoordinator.coordinateScan(ScanningCoordinator.java:75)
    at org.hibernate.boot.model.process.spi.MetadataBuildingProcess.prepare(MetadataBuildingProcess.java:98)
    at org.hibernate.jpa.boot.internal.EntityManagerFactoryBuilderImpl.<init>(EntityManagerFactoryBuilderImpl.java:229)
    at org.hibernate.jpa.boot.internal.EntityManagerFactoryBuilderImpl.<init>(EntityManagerFactoryBuilderImpl.java:164)
    at org.springframework.orm.jpa.vendor.SpringHibernateJpaPersistenceProvider.createContainerEntityManagerFactory(SpringHibernateJpaPersistenceProvider.java:51)
    at org.springframework.orm.jpa.LocalContainerEntityManagerFactoryBean.createNativeEntityManagerFactory(LocalContainerEntityManagerFactoryBean.java:365)
    at org.springframework.orm.jpa.AbstractEntityManagerFactoryBean.buildNativeEntityManagerFactory(AbstractEntityManagerFactoryBean.java:388)
    at org.springframework.orm.jpa.AbstractEntityManagerFactoryBean.afterPropertiesSet(AbstractEntityManagerFactoryBean.java:377)
    at org.springframework.orm.jpa.LocalContainerEntityManagerFactoryBean.afterPropertiesSet(LocalContainerEntityManagerFactoryBean.java:341)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1769)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1706)
    ... 22 more
Caused by: java.lang.ClassNotFoundException: javassist.bytecode.ClassFile
    at java.net.URLClassLoader.findClass(URLClassLoader.java:381)
    at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
    at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
    ... 41 more
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 10.416 s
[INFO] Finished at: 2018-02-09T10:10:11+08:00
[INFO] Final Memory: 45M/347M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.springframework.boot:spring-boot-maven-plugin:2.0.0.BUILD-SNAPSHOT:run (default-cli) on project alarm-map: An exception occurred while running. null: InvocationTargetException: Error creating bean with name 'entityManagerFactory' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaConfiguration.class]: Invocation of init method failed; nested exception is java.lang.NoClassDefFoundError: javassist/bytecode/ClassFile: javassist.bytecode.ClassFile -> [Help 1]
org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal org.springframework.boot:spring-boot-maven-plugin:2.0.0.BUILD-SNAPSHOT:run (default-cli) on project alarm-map: An exception occurred while running. null
    at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:212)
    at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153)
    at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145)
    at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:116)
    at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:80)
    at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
    at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
    at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:307)
    at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:193)
    at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:106)
    at org.apache.maven.cli.MavenCli.execute(MavenCli.java:863)
    at org.apache.maven.cli.MavenCli.doMain(MavenCli.java:288)
    at org.apache.maven.cli.MavenCli.main(MavenCli.java:199)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
    at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
    at org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode(Launcher.java:415)
    at org.codehaus.plexus.classworlds.launcher.Launcher.main(Launcher.java:356)
Caused by: org.apache.maven.plugin.MojoExecutionException: An exception occurred while running. null
    at org.springframework.boot.maven.AbstractRunMojo$IsolatedThreadGroup.rethrowUncaughtException(AbstractRunMojo.java:464)
    at org.springframework.boot.maven.RunMojo.runWithMavenJvm(RunMojo.java:95)
    at org.springframework.boot.maven.AbstractRunMojo.run(AbstractRunMojo.java:221)
    at org.springframework.boot.maven.AbstractRunMojo.execute(AbstractRunMojo.java:178)
    at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
    at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:207)
    ... 20 more
Caused by: java.lang.reflect.InvocationTargetException
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at org.springframework.boot.maven.AbstractRunMojo$LaunchRunner.run(AbstractRunMojo.java:496)
    at java.lang.Thread.run(Thread.java:748)
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'entityManagerFactory' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaConfiguration.class]: Invocation of init method failed; nested exception is java.lang.NoClassDefFoundError: javassist/bytecode/ClassFile
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1710)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:583)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:502)
    at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:312)
    at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:228)
    at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:310)
    at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:200)
    at org.springframework.context.support.AbstractApplicationContext.getBean(AbstractApplicationContext.java:1085)
    at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:858)
    at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:549)
    at org.springframework.boot.web.servlet.context.ServletWebServerApplicationContext.refresh(ServletWebServerApplicationContext.java:140)
    at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:752)
    at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:388)
    at org.springframework.boot.SpringApplication.run(SpringApplication.java:327)
    at org.springframework.boot.SpringApplication.run(SpringApplication.java:1246)
    at org.springframework.boot.SpringApplication.run(SpringApplication.java:1234)
    at com.cmhk.alarmmap.AlarmMapApplication.main(AlarmMapApplication.java:27)
    ... 6 more
Caused by: java.lang.NoClassDefFoundError: javassist/bytecode/ClassFile
    at org.hibernate.boot.archive.scan.spi.ClassFileArchiveEntryHandler.toClassFile(ClassFileArchiveEntryHandler.java:61)
    at org.hibernate.boot.archive.scan.spi.ClassFileArchiveEntryHandler.handleEntry(ClassFileArchiveEntryHandler.java:47)
    at org.hibernate.boot.archive.internal.ExplodedArchiveDescriptor.processDirectory(ExplodedArchiveDescriptor.java:143)
    at org.hibernate.boot.archive.internal.ExplodedArchiveDescriptor.processDirectory(ExplodedArchiveDescriptor.java:118)
    at org.hibernate.boot.archive.internal.ExplodedArchiveDescriptor.processDirectory(ExplodedArchiveDescriptor.java:118)
    at org.hibernate.boot.archive.internal.ExplodedArchiveDescriptor.processDirectory(ExplodedArchiveDescriptor.java:118)
    at org.hibernate.boot.archive.internal.ExplodedArchiveDescriptor.visitArchive(ExplodedArchiveDescriptor.java:54)
    at org.hibernate.boot.archive.scan.spi.AbstractScannerImpl.scan(AbstractScannerImpl.java:47)
    at org.hibernate.boot.model.process.internal.ScanningCoordinator.coordinateScan(ScanningCoordinator.java:75)
    at org.hibernate.boot.model.process.spi.MetadataBuildingProcess.prepare(MetadataBuildingProcess.java:98)
    at org.hibernate.jpa.boot.internal.EntityManagerFactoryBuilderImpl.<init>(EntityManagerFactoryBuilderImpl.java:229)
    at org.hibernate.jpa.boot.internal.EntityManagerFactoryBuilderImpl.<init>(EntityManagerFactoryBuilderImpl.java:164)
    at org.springframework.orm.jpa.vendor.SpringHibernateJpaPersistenceProvider.createContainerEntityManagerFactory(SpringHibernateJpaPersistenceProvider.java:51)
    at org.springframework.orm.jpa.LocalContainerEntityManagerFactoryBean.createNativeEntityManagerFactory(LocalContainerEntityManagerFactoryBean.java:365)
    at org.springframework.orm.jpa.AbstractEntityManagerFactoryBean.buildNativeEntityManagerFactory(AbstractEntityManagerFactoryBean.java:388)
    at org.springframework.orm.jpa.AbstractEntityManagerFactoryBean.afterPropertiesSet(AbstractEntityManagerFactoryBean.java:377)
    at org.springframework.orm.jpa.LocalContainerEntityManagerFactoryBean.afterPropertiesSet(LocalContainerEntityManagerFactoryBean.java:341)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1769)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1706)
    ... 22 more
Caused by: java.lang.ClassNotFoundException: javassist.bytecode.ClassFile
    at java.net.URLClassLoader.findClass(URLClassLoader.java:381)
    at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
    at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
    ... 41 more
[ERROR] 
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoExecutionException

EDIT:

UPDATE: After recieved two valueful answers, I found another strange thing.

If I add

<dependency>
    <groupId>javassist</groupId>
    <artifactId>javassist</artifactId>
    <version>3.12.1.GA</version>
</dependency>

to my pom.xml, the error is gone. But if I use

<dependency>
    <groupId>org.javassist</groupId>
    <artifactId>javassist</artifactId>
    <version>3.22.0-GA</version>
</dependency>

the error will come out again.


UPDATE: after a few hours

I followed suggestion from Kamal Singh to delete .m2/repository manually, and rebuild my environment and application with the latest hibernate-core and org.javassist 3.22.0-GA. Now everything goes fine.

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Answer

Hibernate usage Javaassist for byte code manipulation. Add one more dependency entry for javaassist in your POM file:

<!-- https://mvnrepository.com/artifact/org.javassist/javassist -->
<dependency>
    <groupId>org.javassist</groupId>
    <artifactId>javassist</artifactId>
    <version>3.22.0-GA</version>
</dependency>

Update As per your comment, the hibernate version 5.2.13 is may be using javaassistfrom older group, so you will have to use

<!-- https://mvnrepository.com/artifact/javassist/javassist -->
<dependency>
    <groupId>javassist</groupId>
    <artifactId>javassist</artifactId>
   <version>3.12.1.GA</version>
</dependency>

In your case the error might have propagated because of the jar issue. You can try by removing the javaassist directory from .m2/repository and also from .m2/repository/org/javaassist.

A bug ticket was created in spring boot starter at github on the same at https://github.com/springframeworkguru/springbootwebapp/issues/24

Hope this helps!!

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